Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SNX29_0015700

Sequence Length

177 nt

GC Content

0.4520

GUGCUCAAAGUCCAACUGAAGAAAUAUGUAGGAGCUGUCCAGAUGCUGAAAAGAGAAGGUCAAACAGCUGAAGUGCCAAAUCUUUGGAGUGUUGAUGGAGAAGUUACAGUAGCUGAACAGAAGCCGGGAGAAAUUGCUGAAGAACUCGCAAGCUCCUACGAAAGAAAGCUCAUCGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-31.00 kcal/mol

Ensemble Metrics

Free Energy: -35.59

Frequency: 0.0006

Diversity: 40.08

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.(((.....(((.((...........)).))).((((.(((.(((((.((.......(((((.((.((((((........))))))..))))))).......)).))))).))).)))).....(.(((...((....))...))).).))).)((.(((..((....)).)))))

Thermodynamic Ensemble Prediction

(.{((...,|||{.,,|,,.......,(((((((((((.(((.(((((.{{.......(((({,({.((((((........))))))..))))))).......}}.))))}.))).)),......(.(((...{(....},...))).).)))))))))}...,....}}}...,,)