Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SNX29_0016000

Sequence Length

250 nt

GC Content

0.3640

GGUCAGCUCCUGUGAAGAGAAUUGCUGGGCCCUUUAAGAUUCUUGGCAAAGACUGUCAACAUGCUUCCCAGAAAAACAUGUAUUGACGCCAGCUGUGUAUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAUCUUUGGAGUGUUGAUGGAGAAGUUACAGUAGCUGAACAGAAGCCGGGAGAAAUUGCUGAAGAACUCGCAAGCUCCUACGAAAGAAAGCUCAUCGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-37.07 kcal/mol

Ensemble Metrics

Free Energy: -42.00

Frequency: 0.0003

Diversity: 64.53

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((((((....)).))...))).))))(((...((((((((((......((((((((((.(((...)))...)))))..))))).((((((((((..............................................................................)))).)))))).......)))(((((...((((.((.....)))))).)))))....)))))...))...)))

Thermodynamic Ensemble Prediction

((((((({{((....}}.)}...)))}}}))(((...({{(((((((.....,{((((((({(,(((,.{|,....||},,..}}||{{,,,..}}}}.......................................................,|,..,}}}}}}},,}}}...,|||,||,,}}))}..,....))}(((((...((((.((.....)))))).)))))....,}}},...)}.,.)))