Sequence Details

BLAST PRIMER
Symbol
hsa_SPTA1_0000500
Sequence Length
365 nt
GC Content
0.4767
GGAGAAGUUGAUACGAGUGAGCUCCCAGGACUAUGGGAGAGAUCUUCAGGGGGUUCAGAACUUGCUGAAGAAGCACAAACGCCUAGAGGGGGAGCUGGUGGCCCAUGAGCCUGCCAUCCAGAGCUUGCUAAUGAAGCAUGAAGCUUUGGAAAAUGACUUUGCUGUCCAUGAGACCCGAGUACAAAAUGUGUGUGCACAAGGAGAAGACAUCCUAAAUAAGGAAGGGCUAUGUCUCACUGGAGGACUAUACUGCUUUCCUGAUUGACAAGGAGUCAGAAAACAUCAAGUCCAGUGAUGAAAUAGAGAAUGCCUUCCAAGCCCUGGCAGAGGGCAAGUCAUAUAUUACCAAAGAAGACAUGAAGCAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-105.80 kcal/mol
Ensemble Metrics
Free Energy: -111.52
Frequency: 0.0001
Diversity: 67.27
Structure Visualization
Structure Prediction
MFE Structure Prediction
((...................((((((......))))))...(((((((.(((((...))))).))))))).((......)).....((.((.(((.(((...))).))))).)).(((((((((((((.....))))...)))))))))......))((((((((.....)))....(((((.......)))))...((((.......))))......((((((.((((.((((((((((.((.....(((..(((((........))))).)))......))...)))))))).)).))))......))))))..(((((.....)))))..(((................)))....)))))
Thermodynamic Ensemble Prediction
((....{({,,,.,..,,...((((((......))))))...(((((((.(((((...))))).))))))).((.....,}|,....{{.{{.{{(,(((,,.}}}.})))},)).(((((((((((((.....))))...)))))))))...,,|))||{{{|{|,{{,...}....(({{{....,,,}}}})...((((.......))))......((((((.((((.((((((((((.{{.....(((..(((((........))))).)))......}}...)))))))).)).))))......))))))..(((((.....)))))..|||,,...,..........,,),}}.,})})
Back