Sequence Details

BLAST PRIMER
Symbol
hsa_SPTA1_0010000
Sequence Length
439 nt
GC Content
0.4579
ACUGUAGACAAGACUGCAACCAAAUUGAUUGGUGAUGACCAUUAUGAUUCAGAGAACAUCAAGGCUAUCCGUGACGGGCUGUUAGCCCGGCGGGAUGCCCUACGUGAAAAGGCUGCCACUAGACGUAGAUUGCUGAAGGAGUCAUUGCUUCUGCAAAAACUGUAUGAGGACUCAGAUGACCUAAAGAACUGGAUCAACAAGAAGAAAAAGUUGGCAGAUGAUGAAGAUUACAAGGACAUACAGAACUUGAAGAGCAGGGUUCAAAAGCAGCAAGUCUUUGAAAAGGAGUUGGCAGUUAAUAAGACCCAGCUGGAAAACAUACAGAAAACUGGCCAAGAGAUGAUUGAGGGUGGUCACUAUGCCUCUGACAAUGUGACCACUCGUCUGAGUGAAGUUGCCAGCCUCUGGGAGGAGUUGCUGGAGGCUACAAAACAGAAAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-114.90 kcal/mol
Ensemble Metrics
Free Energy: -125.12
Frequency: 0.0000
Diversity: 112.73
Structure Visualization
Structure Prediction
MFE Structure Prediction
..(((((......)))))(((((.....)))))((((((........(((((..........(((.((((....((((((...))))))...)))))))((((((.....((...)).....))))))....)))))...)))))).((((((((.....)))).))))(((((((((..........((.(((((..............(((((...((((....))))((((..(.....)..))))...(((.(((((....(((.((((.(((((...))))).)).)).))).....))))).)))..........(((....))))))))....))))).))(((((((((..((.......))..))))))))))))))))))...(((...(((((((((.(.....).)))))))))....)))......
Thermodynamic Ensemble Prediction
.,(((((......))))){{{{,.....}||||,,,,,}},,,.,,,,{{,{,,..,}}}..(((.((((.{..((((((...)))))).}})))))))((((((.....((...}}..,..)))))).{(((,{{{{,({,,.||,||||,}||}...{{{|,.,|},{((((({({,,,.......((,{{(((.,...........,(({{(,..,{{{....}}},((((..{.....)..))))...(((.(((((....{((.((((.(((({...})))).))}}).))).....))))).))),.........(((....))))))}}....}}})).}|(((((((((..({.......}}..))))))))))))))))))..,{({,{,((((((({{.,|,,,.,,))))})))).,...,},,....
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