Sequence Details

BLAST PRIMER
Symbol
hsa_SPTA1_0011400
Sequence Length
350 nt
GC Content
0.4543
GAAAACCAUCCUGACCUACCCUUAAUUCAGUCUAAGCAAAAUGAGGUGAAUGCUGCCUGGGAGCGCCUUCGUGGUUUGGCUCUCCAGAGACAGAAAGCUCUGUCCAAUGCUGCAAACUUACAACGAUUCAAAAGGAAAGGACCUGAUUGCUUCCAAAAAGCUUCUGAAUAGGCAUAGAGUCAUCCUGGAGAACAUUGCCAGCCAUGAACCACGCAUUCAAGAGAUAACAGAAAGGGGAAACAAAAUGGUAGAGGAAGGCUCUUCUAAAGAAGCAUGAGGCCUUUCUAUUAGAUCUCAAUUCAUUUGGAGACAGUAUGAAAGCUCUGCGGAAUCAGGCAAACGCCUGCCAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-85.40 kcal/mol
Ensemble Metrics
Free Energy: -93.53
Frequency: 0.0000
Diversity: 83.29
Structure Visualization
Structure Prediction
MFE Structure Prediction
((......))(((......(((((.((..((....))..)))))))(((((((.....((.....))(((((((((.((((((((((.((((((....))))))....................(((((....((((.(.(......).))))).....((((......))))...)))))...))))))).....))))))))))))....))))))).(((((...(((((((.............(((((((....))))))).............))))))).....)))))..((((((((....))).)))))...((....))..(((((....))))).)))
Thermodynamic Ensemble Prediction
((......))(((......((((,.{{..{{....}}..,,}})))|{{{{{(,{,.,{({.{{{,.((((((({{{((((((((((.((((((....))))))......,,............{({{(...,((,..,.,}|}...}{|||},.....||{|......,)))...}}))}...))))))).....))))))))))))...,))}))),.(((((,,.(((((((.............(((((((....))))))).............))))))).}},.}))))..{(((((((....))).))))}.,}||,,,,),..(((((....))))).)))
Back