Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_TCF20_0000200

Sequence Length

315 nt

GC Content

0.5429

GUCAAGGCUGCAGGGAGCCAAGGCGACAGAGCGAUGUCUUGUCUCAAAAACAAACAACUAGCUGUGUUGACUAGAGGCAGCUGUGAAACUGUCCUAAAAGGCUGGACUUCGAGAAGUUUCUUCCACAGAUUGACCAGGUACUGUAGGUUUCAGUCACAACUGGGGUCCUGACACUGGCAAAACCCCACCAGCUGCCCCACAAGUGGGGCCUGCCCUGAGGUCAGGGAGUUCUCUGCUGUACUGGUUCCUUUAUGCACUAGGAAGGCAGACAUGCCCUGAGGAGCCCUCAGAGUCCAACCCCAGCACCCCCACUAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-98.50 kcal/mol

Ensemble Metrics

Free Energy: -105.05

Frequency: 0.0000

Diversity: 111.54

Structure Visualization

Structure Prediction

MFE Structure Prediction

(....((.(((.(((((((....(((((.(((..(((.((((.......)))))))....))).)))))..(((.(((((........))))))))...))))((((((.(((..((((((........(((.((((((....(((((((((((....))))))).)))))).))))))).(((.((...((.((((((....))))))..))..)).)))(((((.....((((((...(((((.(......).)))))...))))))....))))))))))).))).))))))...))).))).)))(....)

Thermodynamic Ensemble Prediction

(....(({({,.{{{||||.,{{(((((.(((..{((.((((.......))))}}}....))).))))).}}.{.((((({{{,{..,|||||{|,...|,|{{(||,{,{,({{{,,|}}}}....},{{{.|{||.,....||||,,{||||....,}|||||{}}||.|.,,})))..}}}}}}.}}|}}|||{{,..,{|||||,,{||,((({{{{(((((.,...((((((...(((((.{......).)))))...))))))..,.)))))),,...)))))),)},,...}}),)}}.)))|,}}.)