Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_TCF20_0002000

Sequence Length

250 nt

GC Content

0.4120

UCUUUCCUCAGUUCUCAUGUGGACUCAAGCUGGGUCUUUCCCUUAGAACCGGACUCAUGGGAUUUUACAGGCAAGGUCUUCAGCAUCCUCCAGCUCUGCUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUGGGUCCAUGAGGGUUGUAUUCUCUGGGCCAAUGGAAUCUACCUGGUUUGUGGCAGGCUCUAUGGCCUGCAGGAAGCGCUGGAAAUAGCCAGAGAGAUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-58.10 kcal/mol

Ensemble Metrics

Free Energy: -62.17

Frequency: 0.0014

Diversity: 66.07

Structure Visualization

Structure Prediction

MFE Structure Prediction

....((((((((((......)))))...((((((.((((.((((((((((.........)).))))).))).)))).).)))))....((((((...........................................................((((((.((((((...))))))))))))...((......))..((((.(.(((((((....))))))).).))))))))))........))).))..

Thermodynamic Ensemble Prediction

.,,,{{{{{({,((,,.,.,|||||...((((((.((({.({{(((({((,......},)).})))).))).)))).}}}))))....((((((....,,.....................................................((((((.((((({...})))))))))))...{(,,,,..}}.}||||.,.(((((((....))))))).},}))}))))))....,},,)))))}..