Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_TCF25_0001500

Sequence Length

436 nt

GC Content

0.4702

GAAAAAUGGACAUUUUCCUCUCCCCCUAAAAAAAGAUAAAACUCCUUCCUGGUUAUUAACUGAAAUGCUGAUCGAGCUUUAUCCUAAAGAAGAUCAGUCGUGGACAAGAACCUUGUGAAAUGUUCCCCAUUUGAGACCCUAAAACUAAUGAAAAUCACAGCUUUUGGAUGGUCCUCUGUAAAUGGAGUAAAUUACAAUAUUUGAGGAGUCUUCCUUACCUCAUCUCUGAAGGCAGAGAUACCCCAUAGCCUCGGGGCCCCGGCUUUCUGUAGAGCUGCUGACAAAGUCCCCCUGAGCCAGAGCUGAGUCACUGCUGUGUCCAACAGUCUCGGGUUCUUGCAUCUUUCCCGUCCAGCGUCUCGCACUGACCCUGGGGGUCCCCAACGCAAGCCCGUUCACAUCUCACUAUUCAUAUCUCAGCAUGAGCGUUCACACU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-100.30 kcal/mol

Ensemble Metrics

Free Energy: -110.20

Frequency: 0.0000

Diversity: 107.66

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.....(((.....)))................(((((....((.....))))))).........(((((((...(((((...)))))..))))))).(((((...((((((((((.........((((((((((((((((((((..(((...))).)).))))))..))).)))...))))))................((((((....))))))....(((((((....))))))).............((((((((.(...((.((.(((.(((((((((((.......(((((.((((((.(.(((....))).)...))).))).)))))......))))...)).))))).)))..)).))...).))))))))...))))))...))))...)).)))..........))((..(((....)))..))

Thermodynamic Ensemble Prediction

((...,,(((.....},,...............,{,,,,..,,{,.,...||{,.,,..,,.....(((((((...(((({...}))))..))))))}.((((({..({{{{(((((,,{{{,.,.(((((((((((((((((({{..(({...))).}).))))))..)))},))...)))))).|,,...,,,......{(((((....}))))}....(((((((....))))))).............((((((((((.,,{,,((.(((.(((((((((((.......(((((.((((((.(.(((....))).)...))).))).)))))..,...))))...))}})))).))),,),.))..}},))))})))...})))))...)))),,.,..,,,..,,},,...))((..(({....)))..))