Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_TCF25_0002100

Sequence Length

356 nt

GC Content

0.5337

AUAAACAUUGACGAUCUUGAGGAUGACCCUGUGGUGAACGGGGAGAGGUCUGGCUGUGCGCUCACAGACGCUGUGGCACCAGGGAACAAAGGAAGGGGUCAGCGUGGAAACACAGAGAGCAAGACGGAUGGAGAUGACACCGAGACAGUGCCCUCAGAGCAGUCUCAUGCAAGUGGCAAACUCCGGAAGAAGAAAAAAAAACAGAAAAACAAGAAAAGCAGCACGGGAGAAGCAUCGGAAAACGGACUAGAAGAUAUCGAUCGCAUCCUAGAGAGGAUUGAGGACAGCACUGGGUUGAACCGUCCCGGCCCAGCUCCCCUGAGCUCCAGGAAGCACGUUCUCUACGUGGAGCACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-86.40 kcal/mol

Ensemble Metrics

Free Energy: -92.61

Frequency: 0.0000

Diversity: 121.78

Structure Visualization

Structure Prediction

MFE Structure Prediction

...........((((((..((((((.((((((.....))))))...((((((.((((((((((((((...)))))...((..........))..(((((..(((((....))).(((.(((...(((.((.......)))))......))).)))...(((......))).....))..)))))................................))).))))))((......))......))))))....(((....))).)))))).....)))))).(((.....((((((((........)))))))).))).(((.((((((.(.((........)).).)))))).)))

Thermodynamic Ensemble Prediction

.....,,{{..{,.{{{|,.,||||.((((((.....))))))...,||(({.((({(,((,((({(...|||}}}|.{{,|,.......,,..{{{{{{{{{(((....))).{,{.{{,...{((.((.......)}))}...{,,|||{|||,,.{{,.,},}.|||.....)),..||||..................................,.,,.}|}|||..{{{{((,....|,,.......,...,}})),}){((({....)))))))}|}...}},|||{{|||...,.,,,))))))))))}}}||{.(((({{,{.{{....,,,,)).),)))))).)))