Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_TCF25_0002500

Sequence Length

237 nt

GC Content

0.5190

AUAAACAUUGACGAUCUUGAGGAUGACCCUGUGGUGAACGGGGAGAGGUCUGGCUGUGCGCUCACAGACGCUGUGGCACCAGGGAACAAAGGAAGGGGUCAGCGUGGAAACACAGAGAGCAAGACGGAUGGAGAUGACACCGAGACAGUGCCCUCAGAGCAGUCUCAUGCAAGUGGCAAACUCCGGAAGAAGAAAAAAAAACAGAAAAACAAGAAAAGCAGCACGGGAGAAGCAUCG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-46.20 kcal/mol

Ensemble Metrics

Free Energy: -50.16

Frequency: 0.0016

Diversity: 72.56

Structure Visualization

Structure Prediction

MFE Structure Prediction

((....))(((...((((..((((..((((((.....))))))....))))..((((((((((((((...)))))...((..........))..(((((..(((((....))).(((.(((...(((.((.......)))))......))).)))...(((......))).....))..)))))................................))).))))))))))....)))

Thermodynamic Ensemble Prediction

,{....,}{{{,{,((({..{{{{..((((((.....))))))....||||..((((({(({({(({...||}}}}}.{{..........,,..{{{{{,.{|(((....))).{{{.{{{...{({.((.......))))},,,,..}}}.))).,.{|{.,},,.}}}....,))..,}))).................................,}.})})))}}},.,,,)))