Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_TPCN1_0000300

Sequence Length

250 nt

GC Content

0.3680

AAGAUGCCUCUAAUGGAGGAGUUUCUGAGCAGCACCCCUGGCCCAGUGGCUUUGAAAGGGAGCUCAAACCAGAGACUAUUUCAAGCCCUGGAUAUCAUAUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACUCGCUCCCCAGCACCGGGAUGUGAUCGAUUUGAUGAUUGAAUCAGAGUUUGCUUUGUGCCAUGAUGGAUUGUGAGAAAAUGGAGUUUUGAUGAAUUAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-45.00 kcal/mol

Ensemble Metrics

Free Energy: -51.00

Frequency: 0.0001

Diversity: 53.32

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.(((.(((((...))))).))))((((.((..((((((.((((((((((....((((.((((((...((((.(.((......))).)))).............................................................((((((((.......)))).))))((((((....))))))....)))))).))))..)))))..)))...)).)).....)).)).....))..))))

Thermodynamic Ensemble Prediction

(({{{.(((((...))))).,)))((((.(({,,,.,||||,((((.((({{{((((...,,(((......))).}}.))))))))))))).............................................................((((,,(({......))),.)))}((((((....))))))||||{{{,,,.||||}|,|{{,,.,}}..,))}}}...,.}},}}}})},),..))))