Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_TPCN1_0006400

Sequence Length

174 nt

GC Content

0.5287

AGGCCUGCCGGCAUCUCCUACAGGCAGUUUGAAGGCCUCAUGCGCUUCUACAAGCCCCGGAUGAGUGCCAGGGAGCGCUAUCUUACCUUCAAGGCCCUGAAUCAGAACAACACACCCCUGCUCAGCCUAAAGGACUUUUACGAUAUCUACGAAGUUGCUGCUUUGAAGUGGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-42.60 kcal/mol

Ensemble Metrics

Free Energy: -45.89

Frequency: 0.0048

Diversity: 29.26

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((.(((((((((((....(((.....((((((.....)).)))).....)))..))).)).)))).)).)).))).)((..((((((((((.((((..(((............))).)))).....((((((((............)))))).))))))))))).)..))

Thermodynamic Ensemble Prediction

((((((.(((((({((((....(((.,,..((((((.....)}.))))..,..)))..))}.)}})))).)).)).))).)((..((((((((((.((((..(((............))).)))).....,||(((((...{....,...)))))).,,))))))))).).,))