Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_TTC3_0005400

Sequence Length

250 nt

GC Content

0.2680

GGUGUGCAAUAUAAAGAUUAUAUCCAAAGUGAGAGGAAUUUGGAAUUUGACAUCUGCAGUAUAUGGUGUAGUAAACCAAUUUCUGUCCUGCAAGAUUAUUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGUUGAAUGAGUGUGUUUUGUACAUAACUUCAGAUACUUGUGAACAUGCCUUAUAUUUGUCCAACAACUGUCAGAAUAAAGAACAUUCUAAAAUGAGAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-27.30 kcal/mol

Ensemble Metrics

Free Energy: -31.63

Frequency: 0.0009

Diversity: 59.51

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((((.(((....((((.((((((..........)))))).......((((((((.(((((((.......)))).....))).)))).)))).............................................................))))...))).))))))))..)(((.((((.(((((.(((...........))).).)))).))))(((((.......))))).......)))

Thermodynamic Ensemble Prediction

,((((,{,{{(({....,|}},((((((.,......,.)))))}.,{{{{{((((((((.(((((((.......)))).....))).)))),,)),........................................................{{{{.{{{{{((({,..|||,|||{,.{,,.,,,|.|||||.|||.....}}}}}}))).)})),,.})))}}|,,.....,}}}|||......}))}