Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_UBAP2_0003200

Sequence Length

249 nt

GC Content

0.5783

AAAUAAACAGAUCUGCUUCUUACAGCUACUUCAUCUGUUCCAGCUCCAAAGACAACAGGCCCUCCCUCUGCCCUCCCGUCUGUGAGCUCCCUGCCCAGCACCACCUCCUGCACUGCACUUCUGCCGUCCACAUCCCAGCACACUGGCGACCUGACUAGCAGCCCUCUCUCUCAGCUUAGCAGUUCGCUCUCCAGCCACCAGAGCAGCCUCUCUGCACAUGCAGCCCUCUCCUCGAGCACGUCACACACA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-44.60 kcal/mol

Ensemble Metrics

Free Energy: -48.23

Frequency: 0.0028

Diversity: 47.64

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((((..(((......)))......)))))))..(((((...((((....(((.........))).....))))..)))))..((((..(((.........(((...)))...((((.(((....((((((....)))).))...)))..))))............)))..))))...(((((.........))))).......((((....))))..(((.....))).............

Thermodynamic Ensemble Prediction

.....(((((((..(((......)))......)))))))..(((((...((((...,(((.........)}),,...))))..)))))..,(((..,(({........|||...}}}...((((.(({.,..((((((....)))).))..,)))..))))............||}..|}}|...(((({.........})))}}},....{(((....))))..{{(.....)))...,,........