Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_UBAP2_0007500

Sequence Length

248 nt

GC Content

0.4274

GCAACAGCUGAACAGAUGCGUCUCGCUCAAGUGAUCUUUGAUAAGAAUGAUUCAGAUUUUGAAGCUAAAGUUAAGCAGAUCCCAGCUUCUGCAGUGGAAAUGCCUGGUUCAGCAGAUGUCACAGGAUUAAAUGUGCAGUUUGGGGCUCUGGAAUUUGGGUCAGAACCUUCUCUCUCUGAAUUUGGAUCAGCUCCAAGCAGUGAAAAUAGUAAUCAGAUUCCCAUCAGCUUGUAUUCGAAGUCUUUAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-54.60 kcal/mol

Ensemble Metrics

Free Energy: -61.01

Frequency: 0.0000

Diversity: 45.79

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((.(.(((((((....((((.((((((((..(((((..((..........)))))))))).))).........(((((........)))))....)).))))...))))))).).)))(..((((((....(((((((((((((.((((......((((....))))....((.(((..((((((.....))))))))).))..........)))).)))))..))).)))))....))))))...)

Thermodynamic Ensemble Prediction

(((.(.(((((((,{..((((.((((({{{,,{((({{{.....,},.,,,}}}|||||||,.,},,,,,,,..(((((........))))),},})}.)))),}.))))))).).)))(..((((((....(((((((((((((.(((({.....((({....})))....((.(((..{(((((.....)))))}))).)).........,)))).)))))..})),}))))....))))))...)