Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_UBAP2_0008100

Sequence Length

303 nt

GC Content

0.5149

CAGAGAAUCACAUCUUACCUGGGCAAAGACUUCAAAUCUCAACCUGAGCCAUCCCCAGUUCUUAGCCAGUUGAGCCAGCGACAACAGCACCAGAGCCAGGCAGUCACUGUUCCUCCUCCUGGUUUGGAGUCCUUUCCUUCCCAGGCAAAACUUCGAGAAUCAACACCUGGAGACAGUCCCUCCACUGUGAACAAGCUUUUGCAGCUUCCCAGCACGACCAUUGAAAAUAUCUCUGUGUCUGUCCACCAGCCACAGCCCAAACACAUCAAACUUGCUAAGCGGCGGAUACCCCCAGCUUCUAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-64.10 kcal/mol

Ensemble Metrics

Free Energy: -71.11

Frequency: 0.0000

Diversity: 58.33

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((......)))).((((((.(((((((((((..((((((.((.((...............))))))))))...((.......))(((((((..((((((...)))..))).)).)))))))))))).))))....))))))......(((((...((..(((.(((((.......)))))..))).....((....)).(((....)))..))...))))).......(((((.(((.....))).))))).................))((((((((.((....)))).))))...))

Thermodynamic Ensemble Prediction

((((((......)))}.((((((.(((((((((((..(((((({((,((...........,.,,)}}}))))))...((.......)){((((((..{(((((...))),.,,,.))}})))))))))))},))}....))))))......,,,{,...,,..,,..(((((.......))))).||}|...,{(({...},,|||,...}}}..,....||||........(((((.(((.....))).)))))...........,.....))(({(({((,((....}})).)))},,.))