Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_UBAP2_0016900

Sequence Length

251 nt

GC Content

0.4064

GACCAGGUUUCUGUAAAGUAAGUUUCAAACUUACUAUUGUCAAAGAUAGAAAGAUGGCAACGAAGAGUGUUGGCACGUACACCUCUGCUAAUUUAUUAGGUCCUAAACCCUGAAGUACACACCUUGGGAAGAAAAAGAAAAUAGAAGGACAUUUAAUCCUGCAGACUAUUCAGAUUCUACAUCUACAGAUGUGUGUGGGACAAAGCUAGUAGUUUGGGAAGCUGCUCAGAAUGGUGCAGAUGAGGGAACUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-49.30 kcal/mol

Ensemble Metrics

Free Energy: -56.01

Frequency: 0.0000

Diversity: 98.32

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((...(((((((..((((((((...))))))))..........)))))))..(((((..((.(.((((........))))))))))))........))))(....((((.(.((((.((..(((((.((..............((((.......)))).(((((((((.((.((((((((..((....)))))))))).....))))))))))).....)).)))))..))))))...).))))....)

Thermodynamic Ensemble Prediction

.((((...(((((...((({{{(({{{||||||||{{((((....,,,,..,,.(({({,.{.,(.((((.,......)))}})))}}}}.,},.,|,|{||(,...{{(|,{.{{,{.{{|.|||||.,,..............||||.......}}||,{{,{{||||,,,.||||,,|||}.,.},,))}))))}))},,...))))))))))}}),))),}}))))))))).(((.|.......)))