Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_UBE3A_0002900

Sequence Length

250 nt

GC Content

0.3320

AGACUGCCAUACUGUUUUCCACAGUGACUGCACCAUUUUACAUUCCCACCAGCAGUGAAUAAGGGUUCCAAUUUCUCUGCAUCUUUUCUAACACUUGGUANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUGAAUUGCUUAUAUGUGGAAGCCGGAAUCUAGAUUUCCAAGCACUAGAAGAAACUACAGAAUAUGACGGUGGCUAUACCAGGGACUCUGUUCUGAUUAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-31.62 kcal/mol

Ensemble Metrics

Free Energy: -34.92

Frequency: 0.0047

Diversity: 51.91

Structure Visualization

Structure Prediction

MFE Structure Prediction

..((((.((((((((((((..((((((((((....................)))))......((.(((((........(((...........................................................................))).......))))).))((((.......))))...)))).)..))))..))))..)))).))))..(((.....(((((...)))))...)))

Thermodynamic Ensemble Prediction

..((((.(((((((({(((..{((((,(({,.....{{,,.,{{{{.....||||}{,,...((.{{||,..,,,.,,||{......,........,,......................................................,,..})),......))))),)}||||}.,}}}.,,,}.,})))).}..)))}..))))..)))).))))..(((...{{((({{...}))))}..)))