Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_UBE3A_0007400

Sequence Length

431 nt

GC Content

0.4246

AUUUUCAUAGAUGACAGUUGAGAACUACUCUCAGAUGAGAUUCUUCCAUUGCUGGGUAAAUACCUUAAAUUGGAAUUACUGGGUCACAUGAUCAGGAGAACCUCAGUCUGACGACAUUGAAGCUAGCCGAAUGAAGCGAGCAGCUGCAAAGCAUCUAAUAGAACGCUACUACCACCAGUUAACUGAGGGCUGUGGAAAUGAAGCCUGCACGAAUGAGUUUUGUGCUUCCUGUCCAACUUUUCUUCGUAUGGAUAAUAAUGCAGCAGCUAUUAAAGCCCUCGAGCUUUAUAAGAUUAAUGCAAAACUCUGUGAUCCUCAUCCCUCCAAGAAAGGAGCAAGCUCAGCUUACCUUGAGAACUCGAAAGGUGCCCCCAACAACUCCUGCUCUGAGAUAAAAAUGAACAAGAAAGGCGCUAGAAUUGAUUUUAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-95.90 kcal/mol

Ensemble Metrics

Free Energy: -102.63

Frequency: 0.0000

Diversity: 86.13

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.((((((...(((.(((........))).))).)))))).)(((.....(((((((.....((((...(((((......((((((((.((.((((((..(((((((.((((....(((.((((.((((.......)).)))))).)))(((.(((...)))..)))..........)))))))))))(((..........)))..(((((((.....)))))))))))))((((((........)).))))......((((....((..((((((......))))))..)).....))))....)))))))))).......)))))..)))).....))))))).((((((..(....)..)))))).......(((.((..(((((....................))).))..)).)))......)))

Thermodynamic Ensemble Prediction

(.((((((...,{{.{{({{{{{...,,)}))),)))))).)(((.....(((((((.....((((...(((((......((((((((.({.{(((({..{{(((((,{{{{,...{((.{(((.((((.......)).)))))}.)}}{((.({{...}}}..)))........,,|}},})))}}|{{{,,,,......}}),.(((((((.....)))))))}}}}||((((((........)).))))},....{(((..,,((..((((((......))))))..)).,,..)))}....}})))))))).......)))))..)))).....))))))).{(((((..{....)..)))))).......,,,.{(,{{,{((................,,,.})).)},.}|.,}}..,,..}))