Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_UBE3A_0008700

Sequence Length

250 nt

GC Content

0.3200

CUUUGUAGUAAGUCUUGAAACCAGGAAAUGUGAGUAUUCUAACUUAUUCUUUUUCAAAAUUGUUUUGGGUCUCUGGGUUUCUCAAAUUUCCAUAGAAUUUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAUACAAGUUUGGAAGCAAUCUUGGGGUACUUACCCACAAGGCUGGUGGAGACCAGAUCAGGAGAACCUCAGUCUGACGACAUUGAAGCUAGCCGAAU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-37.62 kcal/mol

Ensemble Metrics

Free Energy: -42.70

Frequency: 0.0003

Diversity: 71.12

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((((...(((((....)))))...((((((......)))))).....(((((..(((((((((((((((.((((((.(((((((....................................................................))))))))))))..(((((((((....)))).)))))(((((....)))))..).)))).))).)))...)))))..))))))))).......

Thermodynamic Ensemble Prediction

..,{(({{{...(((((....}}|||...{(((((......)))))),,..,|{(((..,{{{||||{({{{{(((({{{{,{{{{{({|,,..,,,.........................................................,,,}}||||||}|||..,((((((((....)))).))))}(((((....)))))..,,||}}},})}}}},|.}}}))}.,})},))),.,})}..