Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_UBE3A_0013400

Sequence Length

164 nt

GC Content

0.3720

GGUAAAUACCUUAAAUUGGAAUUACUGGGUCACAUGAGGGGAGGUAUGGUGUCAAGAAAACAUAGUCACCAUUAUUACGAAAAGUAAAAUAUGGAAGAGAUGAUCCCUACCAUCAAUCAGCUUACAACUAGAGGCACUGACAAAUGUAUACAGAUAGCUGUAAU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-21.20 kcal/mol

Ensemble Metrics

Free Energy: -25.15

Frequency: 0.0017

Diversity: 49.02

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((.(((((((....((..(((....)))..))......)))))))((((.(...........).))))....((((.....)))).....(((........))).))))((....(((((.....((....(((........)))....))..)))))..))

Thermodynamic Ensemble Prediction

((((,,{,((,,....,|}.,||,},.,||,.},{{{..{|,|||||(({(,(,..........,,},||{{..((((.....))))...}}||......,,,)}),)))),|}..}||((((........})}},.,,,,....}}.{((((....))))},}