Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_XPO1_0003800

Sequence Length

295 nt

GC Content

0.3525

GCUUACAGAUACUUUUUACACUCUUACAAAAUGUUGCACAAGAAGAAGCUGCAGCUCAGAGUUUUUAUCAAACUUAUUUUUGUGAUAUUCUCCAGCAUAUCUUUUCUGUUGUGACAGACACUUCACAUACUGCUGGUUUAACAAUGCAUGCAUCAAUUCUUGCAUAUAUGUUUAAUUUGGUUGAAGAAGGAAAAAUAAGUACAUCAUUAAAUCCUGGAAAUCCAGUUAACAACCAAAUCUUUCUUCAGGAAUAUGUGGCUAAUCUCCUUAAGUCGGCCUUCCCUCACCUACAAGA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-45.70 kcal/mol

Ensemble Metrics

Free Energy: -53.71

Frequency: 0.0000

Diversity: 81.81

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((..(((...((((((........(((...)))........))))))))).)))(((((((..(((.((((......))))))).)))))((((((..........(((((((........))))).))))))))...((((.((.(((((........))))).))))))......((((((..(((((...((.(((.((.(((....(((((((.........................)))))))..)))))))).)).)))))...))))))...............))

Thermodynamic Ensemble Prediction

(((..(((...((((((..,.....,,.....}},}...}}))))...))).)))((,((((,,,,,.{|||,,,...,}}}}}}.}}}}}((((((,,.......,({((({{..,.....}))}),),)))))).,.(((,{((.(((((........))))).)))))).,,...{{{((({{(((((....{.{{{.,,..,|,...,,((((,...}}}}............}}}}}}))))||||.,,}|||||.|,.},,,,..})))))),,,,...........))