Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_XPO1_0010800

Sequence Length

208 nt

GC Content

0.3846

UACUAUGGACUACAAAUUUUGGAAAAUGUGAUAAAAACAAGGUGGAAGAUUCUUCCAAGGAACCAGUGCGAAGGUUCAUACGUUUUAUGAAGCUGUGGGGUACAUGAUUGGUGCACAAACAGAUCAAACAGUACAAGAACACUUGAUAGAAAAGUACAUGUUACUCCCUAAUCAAGUGUGGGAUAGUAUAAUCCAGCAGGCAACCAAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-39.00 kcal/mol

Ensemble Metrics

Free Energy: -42.31

Frequency: 0.0046

Diversity: 39.26

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((.(((((..(((...((((((((............((((((...))))))..(((((........))))).))))))))..)))..))))).((((.((.(((((..........))))).))))))....(((((((((((...((((.....))))..)).))))))))).((((......)))).........)))..

Thermodynamic Ensemble Prediction

.....(({.(((((..{(({,.((((((({............((((((...))))))..(((((........))))).})))))))..))),.))))).((((.((.(((((.......,.,)))),.}}))))....(((((((((((...((((.....))))..)),})))))))).((((......)))).........)))..