Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_XPO1_0013000

Sequence Length

210 nt

GC Content

0.3762

GAAAAUUCUCAAAAUGCUCCACUUGUACAUGCAACCUUGGAAACAUUGCUCAGAUUUCUGAACUGGAUUCCCCUGGGAUAUAUUUUUGAGACCAAAUUAAUCAGCACAUUGAUUUAUAAGUUCCUGAAUGUUCCAAUGUUUCGAAAUGUCUCUCUGAAGUGCCUCACUGAGAUUGCUGGUGUGAGUGUAAGCCAAUAUGAAGAACAAUUU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-35.10 kcal/mol

Ensemble Metrics

Free Energy: -40.96

Frequency: 0.0001

Diversity: 45.15

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((((((....(((.(((((((((..(((...((.(((((((((...(.((((..(((((((....))((.(((......))).))...((((((((......))))))))...)))))..)))).)..))))))))).))..(((((..(((......)))..))))))))..)))))))))..))).....)).))))......

Thermodynamic Ensemble Prediction

.....((((((....(((.((((({(((..(((...((.(((((((((.,{({,.,,},||,{{((....|},,|||||,,,,,{,,{,,.,,,.{,.(((((,....})))))....,))))..))))}},,))))))))).))..{((((..(((......)))..))))))))..)))})))))..))).....)),,))}......