Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_XPO1_0016600

Sequence Length

288 nt

GC Content

0.3576

UUCCUGAAUGUUCCAAUGUUUCGAAAUGUCUCUCUGAAGUGCCUCACUGAGAUUGCUGGUGUGAGUGUAAGCCAAUAUGAAGAACAAUUUGUAACACUAUUUACUCUGACAAUGAUGCAACUAAAGCAGAUGCUUCCUUUAAAUACCAAUAUUCGACUUGCGUACUCAAAUGGAAAAGAUGAUGAACAGAACUUCAUUCAAAAUCUCAGUUUGUUUCUCUGCACCUUUCUUAAGGAACAUGAUCAACUUAUAGAAAAAAGAUUAAAUCUCAGGGAAACUCUUAUGGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-43.70 kcal/mol

Ensemble Metrics

Free Energy: -51.20

Frequency: 0.0000

Diversity: 83.46

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((((((((.............(((((..(((......)))..)))))(((...(((.((.(((((....((((((......))))))......))))).)).))).....)))......(((((...(((((((...((((((........))).)))...))).)))).((((((((((......))))))....))))...........)))))...........)))))))((((...............)))).....))))))..)((((...))))

Thermodynamic Ensemble Prediction

((((((((((((((....,,.,{{,..{{{{{..{({,,,,,,,}|{{|||||({{,.{(((.((.(((({....((((((......))))))......}}))).)).))}.....|||.....,((,,..)}|(((,{{...((((((........))).)))...,}}.)))}..,,{((((((......})))))},..})))}})),,},,...,,))}}..,,.....))))))){{{{...,,..........}}},.....)))))}.,)((((...))))