Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_XPO1_0018900

Sequence Length

231 nt

GC Content

0.3506

AAAGAAAAGGUGUAUAUCGGAAAAUUAAAUAUGAUCCUUGUUCAGAUACUGAAACAAGAAUGGCCCAAACAUUGGCCAACUUUUAUCAGUGAUAUUGUUGGAGCAAGUAGGACCAGCGAAAGUCUCUGUCAAAAUAAUAUGGUGAUUCUUAAACUCUUGAGUGAAGAAGUAUUUGAUUUCUCUAGUGGACAGAUAACCCAAGUCAAAUCUAAGCAUUUAAAAGACAGGCAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-36.90 kcal/mol

Ensemble Metrics

Free Energy: -41.81

Frequency: 0.0003

Diversity: 67.11

Structure Visualization

Structure Prediction

MFE Structure Prediction

.........((.(((...((((((((((((((....(((((((((...))).))))))..(((((........)))))..((((..(((.(((.(((((((..(.....)..)))))))..))).)))..))))...........(((((..(((....))).)))))))))))))))).))).))).))...........(((...(((...........)))..)))..

Thermodynamic Ensemble Prediction

...{{,..{{(,((({{.{{,.,,{{,,||||,.,,(((((((((...)))}}}))))..(((((........)))))..|{{{..(((.(((.(((((((..(.....)..)))))))..))).)))..}}},....,,|.|..|||||..,{{,{{{|||,,,},||,|||||||||.,,,.|||,,,.......,,,}|||}}}}}}...}}}}},..,)},,)},..