Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_XPO1_0020600

Sequence Length

180 nt

GC Content

0.3556

UACUAUGGACUACAAAUUUUGGAAAAUGUGAUAAAAACAAGGUGGAAGAUUCUUCCAAGGAACCAGUGCGAAGGAAUAAAAAAAUACGUUGUUGGCCUCAUUAUCAAGACGUCAUCUGACCCAACUUGUGUAGAGAAAGAAAAGGUGUAUAUCGGAAAAUUAAAUAUGAUCCUUGUUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-19.90 kcal/mol

Ensemble Metrics

Free Energy: -24.25

Frequency: 0.0009

Diversity: 52.26

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((((((....((((....(((.......)))...((((((...))))))(((..((((.(((................)))..)))))))............(((....)))))))....)))).........((((..(((((...........)))))..))))))))).

Thermodynamic Ensemble Prediction

.....((((({{({....((({....,{{{,....,{||{.{(({{{{...}|||||.,,..{{,..|{|,,}},.........},),)}}))}},}||.,,.,||,|..(((....)))}}}},,},}))}}.,......((((..(((((..,........)))))..))))))))).