Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_XPO1_0022900

Sequence Length

250 nt

GC Content

0.3760

CUGAGAUCGCGCCAUUGCACUACGGCCUGGGCACCAAGAGCGAAACUCAGUCUCAAAAAAAAACCCACACUUGGCUCACAUUGAAUAGAGAAGAAGCGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGAGAUCAUGCCACUGCACUCCAGCCUGGGCGACAAAGACCCUGUCUGAAAAAAGCAUCAUGUGAUUCAUUUUACUCAAUUUUUGUAUAUGAGGUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-33.52 kcal/mol

Ensemble Metrics

Free Energy: -38.02

Frequency: 0.0007

Diversity: 59.16

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((.(((((((...((......))...))).......))))..))))).((((..............((((((...........................................................................)))))).....(((...((......))...)))((((.......))))((((....(((...)))..)))).....((((...........)))).))))

Thermodynamic Ensemble Prediction

(((((.(((({{{..,((.,....}}.,}))),......))))..))))).((({.........,,...,{{||({{,....,...................................................................}}}|||....{((....||,...,,|,|.{|||,,,,..}.},,,)})}|......,,,||,}}})}}|||,.,|,({{{,,....,,}.,)))).))))