Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_XPO1_0023500

Sequence Length

240 nt

GC Content

0.3917

UAAUCUAUGCCAGCAAUUAUGACAAUGUUAGCAGACCAUGCAGCUCGUCAGCUGCUUGAUUUCAGCCAAAAACUGGAUAUCAACUUAUUAGAUAAUGUGGUGAAUUGCUUAUACCAUGGAGAAGGAGCCCAGCAAAGAAUGGCUCAAGAAGUACUGACACAUUUAAAGGAGCAUCCUGAUGCUUGGACAAGAGUCGACACAAUUUUGGAAUUUUCUCAGAAUAUGAAUACGAAAUACAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-44.40 kcal/mol

Ensemble Metrics

Free Energy: -48.51

Frequency: 0.0013

Diversity: 50.31

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.((((((..(((((((((.(((.((((..........((((((....))))))((((((((((.......))))).))))).......)))).))).))).)))))).....))))))..((((((((......(((((..(((........)))..)))))...)).)).))))..))(((((((....)))......((((((((....)).))))))..............))))

Thermodynamic Ensemble Prediction

((.((((((..(((((((((.(((.((((..........((((((....)))))){(((((((((.......))))).))))}.......)))).))).))}}}))))).....))))))..{{((((((......{{{{|,,||{........}})..))))}...}|.}}.))))..))|{{{{{{....)))....,,((((((({....}).)))))).,}..,,|......}}})