Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_XPO1_0025200

Sequence Length

333 nt

GC Content

0.4565

GCUGGAGCACAAUGGCUUGAUCACAGCUCACUGCAGCCUUGACUUCCCAGGCUCAAUCUUCCCACCUCAGCCUCCUGAGUAGCUGGGACCAUAACAAAGAAUGGCUCAAGAAGUACUGACACAUUUAAAGGAGCAUCCUGAUGCUUGGACAAGAGUCGACACAAUUUUGGAAUUUUCUCAGAAUAUGAAUACGAAAGAAGAAAAGGGGUGUCUUCCUGUGCAACUGACACAGCUAGGCUUUGACGGCAGGCCUCCACAAGUACUAUGGACUACAAAUUUUGGAAAAUGUGAUAAAAACAAGGUGGAAGAUUCUUCCAAGGAACCAGUGCGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-75.70 kcal/mol

Ensemble Metrics

Free Energy: -84.07

Frequency: 0.0000

Diversity: 76.51

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((.((.....(((((.......))).)))).))))((((((((((..((...((((((((.(((((((....)))((((..((((.((((........)))))))).....))))..(((((((....((((((....)))))).(((....)))(((((..((((....((((((((.....)))....)))))....))))..)))))...((((((....).)))))...(((((.......)))))((((.((((....((.....)).))))))))))))))).........))))))))))))...))..)))...))).).)))

Thermodynamic Ensemble Prediction

((((.((.....{((({.,....}))),}})).))))((((((((((..((...(((((((({(((((((...,}}}{{{{,|((((.((((........))))}))}.....}}}}..((((({{...,((((((,,..}}}|||.(((....)))(((((..((((....{(((((((.....)))....))))}....))))..)))))...((((({....}.)))))..{(((({{{....})))))|{{{,||||,.,.,}},...|...,,,)},.}}))))).........))))))))))))...))..)))...))).),)))