Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_XPO1_0026600

Sequence Length

234 nt

GC Content

0.3932

UAAUCUAUGCCAGCAAUUAUGACAAUGUUAGCAGACCAUGCAGCUCGUCAGCUGCUUGAUUUCAGCCAAAAACUGGAUAUCAACUUAUUAGAUAAUGUGGUGAAUUGCUUAUACCAUGGAGAAGGAGCCCAGCAAAGAAUGGCUCAAGAAGUACUGACACAUUUAAAGGAGCAUCCUGAUGCUUGGACAAGAGUCGACACAAUUUUGGAAUUUUCUCAGAAUAUGAAUACGAAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-41.90 kcal/mol

Ensemble Metrics

Free Energy: -47.10

Frequency: 0.0002

Diversity: 52.45

Structure Visualization

Structure Prediction

MFE Structure Prediction

...((((((..(((((((((.(((.((((..........((((((....))))))((((((((((.......))))).))))).......)))).))).))).)))))).....))))))..((((((((......(((((..(((........)))..)))))...)).)).))))..((..(.(((....))).)..))((((((((....)).))))))............

Thermodynamic Ensemble Prediction

...((((((..(((((((((.(((.((((..........((((((....)))))){(((((((((.......))))).))))}.......)))).))).))}}}))))).....))))))..,,((((({,.....,.,||}}||.....,...|||..},}}}...,|{||{|,,,.})})}).{{{....)))....|,((((((({....}}.)))))).,,.........