Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ZEB1_0009400

Sequence Length

166 nt

GC Content

0.3313

GUUGGAGAUGAUGGUUACAGCAGUGGAGCUGGAGAGAAGGGAAUAGAUUUGAAAUUUGGGAUGUGAACAAAGCCUUGUAUUUGACAGAAAUGUAAAACUAUUAAUAGUAUUGUUAUUGUUCCACCUAUAGAAUCUGAUUAUAAGAUUAUCUCUAAAAUACUUUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-24.50 kcal/mol

Ensemble Metrics

Free Energy: -28.39

Frequency: 0.0018

Diversity: 32.31

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((((((((((.....((((......)))).........((.(((((((......(((((((..(((((.((...((((((.(((....))).))).))).....)).)))))..)))))))......))))))).)).....)))))))))))..(......).

Thermodynamic Ensemble Prediction

.(((((((((((.....((((......)))).........,{.(((((((......(((({((.,(((((.((..,((({({.(((....))).,}}.}}}..,..)).)))))..))))))),,,...))))))).}}.....)))))))))))..,......,.