Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ZEB1_0011200

Sequence Length

250 nt

GC Content

0.2680

UUUUCAGUUUAAAUUCUCAACUGGCAAUUGGCCGAAAACUCCCAUCUGAAGACAUGAUCAUCCAAAUGUCAUUUUGUGAUUUGGCUACUGUCUGCUUGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUACAAAAAUAUUUACUACCUUCUUUGUUUCAUUUCAGAAUGACCUUAUUUAAAAGUGUAUGAGGCUAUUUAUAAUCAACUCUGUGGAAGUGAUUAAAGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-26.70 kcal/mol

Ensemble Metrics

Free Energy: -31.88

Frequency: 0.0002

Diversity: 66.13

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((..............((((.....))))...........)))))))(........((((..(((((...))))))))).....(((.....)))......................................................................((((((..(((((((.(((((.((((((..........)))))).))))).....((......))))))))).)))))))

Thermodynamic Ensemble Prediction

((((({({{.....,.,.}}},||{,..,{||||||}}{((.{{,{,(({({(({,.....,{{,|}}||,|,.,),)))))))},...|||.....))}....................................................,,,,..............,,||||,.|{{{|||,||{||.((((((.,,....,,.)))))).,}},,.{{{{({.,{{....))}))))})).,)))