Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ZEB1_0012200

Sequence Length

224 nt

GC Content

0.3929

UUUUCAGUUUAAAUUCUCAACUGGCAAUUGGCCGAAAACUCCCAUCUGAAGACAUGAUCAUCCAAAUGUCAUUUUGUGAUUUGGCUACUGUCUGCUUGACAUAGGAAAGCACUAUCAAGAAAGACUAAUGGAGUGACUAUCAAAAGGAAGUCAAUGGAGAAUGUACCCAAGAGUGUGGGGAUGUUUUCAAUUACUGCAUUUCCUUCAGAGAACAAGAACCACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-44.20 kcal/mol

Ensemble Metrics

Free Energy: -48.67

Frequency: 0.0007

Diversity: 81.66

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((..((....((((((...((((.....))))...((((((((..((((((((..........))))).))).)))...........((((.(((((..(((.......))))))))..))))....)))))((((.((....)).))))....))))))..))..)))).(((((...(((((((...................)))))))....))))).

Thermodynamic Ensemble Prediction

(({({{((,...,,,,{,.,,|{{{...,,}}}}....,{,...{{{{{{{|{,{{.,,,,(((.,.{{(.{{{{,||||,,,|{{.,{((({.{{{||,,{{|...,,}.},))))}),,))))...})))}|{{{{.((...,||||||||...||||||{,,|{{|,,,.,,|||}.,|||||||......,,.}},,,}}},,))},,,,....},,))}