Sequence Details

BLAST PRIMER
Symbol
hsa_ZEB1_0021900
Sequence Length
642 nt
GC Content
0.4377
GAGUAUCAAAUGUAGAGGAUCAGAAUGACUCUGAUUCUACACCGCCCAAAAAGAAAAUGCGGAAGACAGAAAAUGGAAUGUAUGCUUGUGAUUUGUGUGACAAGAUAUUCCAAAAGAGUAGUUCAUUAUUGAGACAUAAAUAUGAACACACAGGUAAAAGACCUCAUGAGUGUGGAAUCUGUAAAAAGGCAUUUAAACACAAACAUCAUUUGAUUGAACACAUGCGAUUACAUUCUGGAGAAAAGCCCUAUCAAUGUGACAAAUGUGGAAAGCGCUUCUCACACUCUGGGUCUUAUUCUCAACACAUGAAUCAUCGCUACUCCUACUGUAAGAGAGAAGCGGAAGAACGUGACAGCACAGAGCAGGAAGAGGCAGGGCCUGAAAUCCUCUCGAAUGAGCACGUGGGUGCCAGGGCGUCUCCCUCACAGGGCGACUCGGACGAGAGAGAGAGUUUGACAAGGGAAGAGGAUGAAGACAGUGAAAAAGAGGAAGAGGAGGAGGAUAAAGAGAUGGAAGAAUUGCAGGAAGAAAAAGAAUGUGAAAAACCACAAGGGGAUGAGGAAGAGGAGGAGGAGGAGGAAGAAGUGGAAGAAGAAGAGGUAGAAGAGGCAGAGAAUGAGGGAGAAGAAGCAAAAACUGAAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-133.60 kcal/mol
Ensemble Metrics
Free Energy: -146.11
Frequency: 0.0000
Diversity: 137.14
Structure Visualization
Structure Prediction
MFE Structure Prediction
.(((......((((((..((((((.....)))))))))))).(.(((.......((((((.....(((((...((((((((...(((((.((....)).)))))))))))))........((((((.(((........)))))))))((((((((.....)))).....))))....)))))......))))))...........((((((..(((..(((((..(.(((((((..((........))....))))))))..))))).......(((((..((((((...((((.(((((..(.......(((((.((.((((((((((......(..(((......)))..)......(((.((((..((((...))))....)))))))...((.((((....))))))...(.(((((((....((((..(((........)))...))))....)))).))).)......))))).............))))).......................................((((......)))).)).))))).......)..))))).)))).)).))))..)))))...............))).))))))))).)...........)))....
Thermodynamic Ensemble Prediction
.{((..,...{((((({,((((((.....)))))))))))}{({(,,.......,,,,||}}...,,,,,...((((((((...(((((.((....)).))))))))))))).....,,.((((({,(((........)))))))))||,,{{{{.....}|||,,,..||||,...|||||......)))}))..,,,}.....{({,,{..{||..(((((..{.(((((((..((.,......))....)))))))}..))))).....,.(((((..((((((...((((.(((((..{...,...(((((.((.(((((,(({(......{..(((......)))..,..|...(((.((((..((((...))))....)))))))...{{.((((....)))))}...(.(((((((....((((..(((........}})...))))....)))),,)).).,....,}}}}.............}},)),}}.........,{,......}}.}..............((((......)))).)).)))))......,),.)))))}))},.))}})))..}))))......,........)},.,,}))}}},.............}))....
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