Sequence Details

BLAST PRIMER
Symbol
hsa_ZKSCAN1_0000600
Sequence Length
236 nt
GC Content
0.4915
GCUGGUCUCGAACGCCUGAUCUCAGGCAGUCCGCCAACCUCAGCCUCCCAAAGUGCUGGGAUUACGGGCGUGAGCCACUGUGUGCCCAGCCUUUGUUUACAUUUUCAAGACUAUGCCCUGGAAAAAUACUGGGCUGUUUGGAACACAGCCUUUGAGCUUGUAACUUCAAGCCGUUGUUUAAGAAAAUCAUUUCUGUUUAUCCUAGGUGAGAACUGAGGUAUCCUUAGCUGCUGGAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-73.60 kcal/mol
Ensemble Metrics
Free Energy: -78.52
Frequency: 0.0003
Diversity: 38.01
Structure Visualization
Structure Prediction
MFE Structure Prediction
((((((..((.(((((((....))))).)).))...)))..)))(((((((((.((((((..(((((((....)))..))))..)))))))))))...............((..(((..(((.((((...(((((((.......)))))))....(((((......))))).........(((((....))))))))).)))..))).))..((((((...)))))).....))))
Thermodynamic Ensemble Prediction
((((({..((.(((((((....))))).)).))...,}},})))(((((((((.((((((..(((((((....))).,,)))..))))))))))).......,{{{,.,.,...((({.({{.{{{,...|((((({.......})))))}..(.(((((......)))))},.......(((({....}))))}}}|.}}}..)))}}}..((((((...)))))).....))))
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