Sequence Details

BLAST PRIMER
Symbol
hsa_ZKSCAN1_0001100
Sequence Length
250 nt
GC Content
0.4600
GAGUCUCUCUCUGUCACCCAGGCUGGAGUGCAGUGGCGCGUUCUCAGCUCACUGCACCCUCCACCUCCCAGGUUCAAGUGAUUCUCCUGCCUCAGCCUCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGUGUCCCUCAUUCUGGAGGAAUGGGGAUGUCAGAAUCUGGCUCGGAGGAAUCUCAGUAGGGACAACAGGCAGGAGAAUUAUGGGAGCGCAUUUCCCCAGG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-81.00 kcal/mol
Ensemble Metrics
Free Energy: -83.19
Frequency: 0.0285
Diversity: 16.75
Structure Visualization
Structure Prediction
MFE Structure Prediction
(((...)))((((......(((.(((((((((((((.((.......)))))))))))..))))))).....((((..(((((((((((((((...(((((....................................................(((((.((((((...)))))))))))(((((...)))))..)))))..((((....))))....)))))))))))))))..)))).........))))
Thermodynamic Ensemble Prediction
(((...)))((((...,,.{((.(((((((((((((.((.......))))))))))}.,)))))))....}||,,..(((((((((((((((...(((((....................................................(((((.((((((...)))))))))))(((((...)))))..)))))..((((....))))....))))))))))))))){{|||,....,}}},))))
Back