Sequence Details

BLAST PRIMER
Symbol
hsa_ZKSCAN1_0001400
Sequence Length
250 nt
GC Content
0.3760
GAAUAGUAAAGAAACACAUCAUAAAACCUCCCAGGACAUAAAGGUGAGCACAGACCCUGUUUGGAUCAAGUCAGUUCCUGGAGCCUGAAUGAUGACUGCUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAUGAAACUUUCAUUGGUCCCAUCGUUGUGCGCAGGGUGCAACUGGCUACCUAGAAGCUGAUGGCAGGAGACUGUUUCACACACAGGAGAUUGUGAGCUGU

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-44.30 kcal/mol
Ensemble Metrics
Free Energy: -48.50
Frequency: 0.0011
Diversity: 45.57
Structure Visualization
Structure Prediction
MFE Structure Prediction
.............(((..((((((...((((............(((((.((((.(((((((........(((((((.((((((((.................................................................(((..(((......)))..))).(((((((.....))))))).)))).)).)).))))))))))))).).))))))))).....)))).))))))..)))
Thermodynamic Ensemble Prediction
(((((((.........((((((..,..(((({((((........(((...(((((...)))))..))).....},))))))))..,..)))))).{{{{{..................................................((({,...,}}}}.|||.{{|,.(((((((.....))))))),||{{,},....}})}}..)))))...))))))))((((((((....)))))...)))
Back