Sequence Details

BLAST PRIMER
Symbol
hsa_ZKSCAN1_0001500
Sequence Length
250 nt
GC Content
0.3480
GAAUAGUAAAGAAACACAUCAUAAAACCUCCCAGGACAUAAAGGCUGCACAGGAGAAGGAUGGUAUCGUAAUAGUGAAGGUGGAAGAGGAAGAUGAGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCUUAACCAGUGUGUUUAUUGGUGAUGACAUUUAAGGAAUAUUAGACAUGGAGCUUAAGGAUGCAUCCUCUCUUCCGUGCAUCCUGGAGGACAGCCAGCAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-38.60 kcal/mol
Ensemble Metrics
Free Energy: -42.64
Frequency: 0.0014
Diversity: 33.35
Structure Visualization
Structure Prediction
MFE Structure Prediction
(....((......))...........(((((.((((.........(((((.(((((((((((.((((.....(((....(((........................................................................(((((((....))))))).......(((((......))))))))...)))....)))))))))).))))).))))))))))))))....)(....)
Thermodynamic Ensemble Prediction
(....{{...,.......,,......((({{{((((.........(((((.(((((((((({{((((.,...(((....(((........................................................................(((((((....))))))).......{((((......)))}})))...)))..,.)))))))))).))))).))))))))))))))....)(....)
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