Sequence Details

BLAST PRIMER
Symbol
hsa_ZKSCAN1_0001600
Sequence Length
250 nt
GC Content
0.4000
GAAUAGUAAAGAAACACAUCAUAAAACCUCCCAGGACAUAAAGGUGAGCACAGACCCUGUUUGGAUCAAGUCAGUUCCUGGAGCCUGAAUGAUGACUGCUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACUCCUGUGCUUUUGAGCAAGGACUUUUGCCCUCUAGAAAGCAACUGAGGCCAGGUGCGGUGGCUCACGCCUGUAAUCCCAGCACUUUGGGAGGCCGAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-46.00 kcal/mol
Ensemble Metrics
Free Energy: -51.28
Frequency: 0.0002
Diversity: 48.89
Structure Visualization
Structure Prediction
MFE Structure Prediction
(....((((((.....((((((.....((((.((((........(((...(((((...)))))..))).......)))))))).....))))))...........................................................((((.((((....)))))))).)))))))(((......(((.(((....))).)))((((.....)))).((..((((((....)))))).)).)))
Thermodynamic Ensemble Prediction
(....{{.........((((((..,..(({((((((..,.....(((...(((((...)))))..))).....,,))))))))..,..))))))...........................................................{({{.((((,,,.||}}|||,,,,||||}|||..}}}}}},.|{|.{{{({{{((,({,,...}.))))}}...((((({....}))))))))},})
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