Sequence Details

BLAST PRIMER
Symbol
hsa_ZKSCAN1_0003700
Sequence Length
250 nt
GC Content
0.4440
CUCUUCCUGCUGCCCACAUUCCUGCACCCCCUCAUGAGGGUAGUCCCAGAGACCAGGCGAUGGCAUCUGCACUAUUCACAGCGGAUUCCCAGGCAAUGGUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGUAUGUUCCAAUCGUGAUGAAUUUGAGAAACAUUGCAAGAGGGAGCUCAAUCUUGGCCGGGCGCCGUGGCUCACGCCUGUAAUCGCAGCACUUUGGGAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-51.00 kcal/mol
Ensemble Metrics
Free Energy: -54.94
Frequency: 0.0017
Diversity: 63.09
Structure Visualization
Structure Prediction
MFE Structure Prediction
(.......)((.((((.....((((...(((((....(((....)))....((((.((...((.((((((..........)))))).))...))..))))..................................................((......))....((((((...........))))))..))))).((.((....))))((((((..........)))))).....)))).....))))))
Thermodynamic Ensemble Prediction
(.......)((.((((.....((((,{{(,(....}.)))}.,,|,,.,,|||(({(({.{((,((((((..........)))))).||{,.||..||},..................................................{(...{{{||..{{{{{{,|...,},.,,..))))))..||}))}||.,.....,||||{{{{},}.,,))}}.}))))).....)))).....))))))
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