Sequence Details

BLAST PRIMER
Symbol
hsa_ZKSCAN1_0003800
Sequence Length
250 nt
GC Content
0.4720
CUCUUCCUGCUGCCCACAUUCCUGCACCCCCUCAUGAGGGUAGUCCCAGAGACCAGGCGAUGGCAUCUGCACUAUUCACAGCGGAUUCCCAGGCAAUGGUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUUGAGAAACAUUGCAAGAGGGAGCUCAAUCUUGGCCGGGCGCCGUGGCUCACGCCUGUAAUCGCAGCACUUUGGGAGGCCGAGGCAGGCGGAUCACGAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-58.54 kcal/mol
Ensemble Metrics
Free Energy: -62.61
Frequency: 0.0013
Diversity: 65.01
Structure Visualization
Structure Prediction
MFE Structure Prediction
.(((.(((((((((...........((((.(....).))))..((((((((.....(((((.((((((((..........)))))(((((..((((((.............................................................))))))....))))).........(((.((((......))))..)))))).)))))....)))))))))))...)))))).))).......
Thermodynamic Ensemble Prediction
.(((.(((((((((........,,,{{((.{....}.)))),}{(((((((.,{,.(({{({({((((((..........)))))}((((..((((((.............................................................))))))....))))|{,,......|||.||||},|,|{|}||.,||||||.,||}}.|,.}}}}))))))).,.}))))),))).|....}
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