Sequence Details

BLAST PRIMER
Symbol
hsa_ZKSCAN1_0004200
Sequence Length
221 nt
GC Content
0.4480
GAGAAUUAUGGGAGCGCAUUUCCCCAGGGUAAGACGGAUGCAGGCUUACUGUCUGAUAAGAUGGUUUUGUCUCUCUGUGUGUUAGCUGUGGGAUCUCUGAUGUGUUCAAUUGAGUGUUGAGGAGUUAGAGACUACCUAUCCCCUUUUGUAGACCAGAUGGAAAGUGAGAAUGUUUGUGUUCAUUUAACUCCAGAAGCAUGGUACUGUGACCCUGAUUCCAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-56.70 kcal/mol
Ensemble Metrics
Free Energy: -60.72
Frequency: 0.0015
Diversity: 56.93
Structure Visualization
Structure Prediction
MFE Structure Prediction
..((((((.(((..((((..(((((((....(.(((((.(.((((..(((((((....)))))))...)))))))))).).....))).))))((((((((...((((((.....))))))..))))))))((((..(......)..))))((((..(((((((((((.((....)).)))))))...))))......))))..)))).)))))))))...
Thermodynamic Ensemble Prediction
,,({{(((.(((.{((((..{{(((({{,{,(.(((((.(.((((..(((((((....)))))))...))))}))))).).,,..)),,)))}((((((((.,.((((((.....)))))).,)))))))){{{{,,{,.....|,.|}}}{{{{,,{||{,{{{{{{.{{....}},}))})}).,}))|},,..,,}|||..,}},.))}))})))..,
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