Sequence Details

BLAST PRIMER
Symbol
hsa_ZKSCAN1_0004600
Sequence Length
281 nt
GC Content
0.4199
AUUAAAAAACAAAAGUCACACUUAAGGAUCCUUCUAGUCACAUCAGCAGUGUUCUGCCUUUAUGUAGUAGUUGGGCAUAUAAUCCUUCCACACAGCCCCUGCAGGGAAAGGCUAAUCUUACGGAUAAUCCACGUGAGAUUUCCACACAAGAGAAAAGCACACGCAUAGUGAAAUGUCAGUCUUUUCAGUAAUGAGGAUACCUUUAAGGCACUCUUGGACUCUCGGCAACCACAACAUAAUAGUUGAAAGAUCAAGAUUGGCUCCACGAAAGUGAUACGGAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-55.30 kcal/mol
Ensemble Metrics
Free Energy: -61.25
Frequency: 0.0001
Diversity: 61.11
Structure Visualization
Structure Prediction
MFE Structure Prediction
..............((..(((((((((((((((..((.(((.......)))..))((((((.(((((.....((((..................)))))))))...)))))).(((((((((.........)))))))))...........((((((.((..((((......))))..))))))))......)))))).))))..((.((.((((((.((.(((((...............))))).)).)))))).)).))......)))))..))....
Thermodynamic Ensemble Prediction
.,,..........,||,.,.{{{((((((((({,.,,.,((,,..,,,|}}..}}||{{{{.||{,({{{..((((..................)))})))),.,,}}}))).(((((((((,......,.))))))))).,,........((((((.((..((((......))))..))))))))......)))))).)))),,||.((.((((((.((.(((((...............))))).)).)))))).)).}}.({{....)))....,,.}
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