Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ZNF609_0009400

Sequence Length

250 nt

GC Content

0.4560

GUUCUGUGACUCCCCGACCAGUGACCUGGAAAUGCGCAAUGGCCGGGGUAGAGGCAAACGCAUGCGUCCCAACAGUAAUACACCUGUCAAUGAGACAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCACCUCUCCUUCCCAGCGCCUGAUGUCCACACACCACCACCACCACCACUUGGGGUACUCAUUGCUCCCAGCACAGUACAACUUACCCUAUGCAGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-39.20 kcal/mol

Ensemble Metrics

Free Energy: -43.30

Frequency: 0.0013

Diversity: 61.26

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.(((.((..(((((.(((.((..(.......)..)).))).)))))..((.(((......))).))...............(((((.....)))))................................................................)).))).))(((.(((.............(((........))).(((((...((((...)))).)))))............))).)))

Thermodynamic Ensemble Prediction

((.(((,(,..(((((.((({((.,,,,,....||||..}||.}}|||.{(({({,......|||,},......{,.......(((((.....)))))........................................................,}}},,,.}},))),)){((.{({.............,,,.,......}))}|{({{...((({...)))).)))},............))}.)))