Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ZNF652_0003800

Sequence Length

381 nt

GC Content

0.4199

AAGCACAUGAACGUUACUCAUAGGCGCAUGCAGAUUUGUGAUAAAUGUGGCAAGAAGUUUGUCCUGGAAAGUGAGCUGUCCCUUCACCAGCAAACAGACUGUGAAAAAAACAUUCAGUGUGUUUCCUGUAACAAAUCGUUCAAGAAACUCUGGUCCCUUCAUGAACAUAUCAAGAUCGUCCAUGGAUAUGCAGAAAAGAAAUUUUCCUGUGAAAUUUGUGAGAAGAAAUUCUAUACCAUGGCUCAUGUGCGGAAACACAUGGUUGCACACACAAAAGACAUGCCAUUUACAUGCGAAACCUGUGGAAAAUCAUUCAAACGCAGUAUGUCACUCAAGGUGCACUCCUUGCAGCAUUCUGGAGAGAAGCCCUUUAGAUGCGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-82.40 kcal/mol

Ensemble Metrics

Free Energy: -90.90

Frequency: 0.0000

Diversity: 115.59

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((((((.(((..((((((((....))....((((.((....)).))))...(((((..((((.(((.((....)).)))..)))))))))...))))))....))).)))).)))))))(.((((((.....(((((.(((...........))).)))))...........(.((((((.(((((((((((....)))).))))..........((((....)))))))))))))).((((((......)))))))))))).........(((((((........((((......(((......))).....)))))))))))...(((((......)))))..((((.((((((.......))))))))))..)

Thermodynamic Ensemble Prediction

.,((((,(({{.({{,{{((({((({{{{|,,,{|.{||,,,..,||||{{{{..(((((((.((((.(((.((....)).)))..))))...)))))))|{{,.....,}.}}}}{{{{(({{({,(({{(,....(((((.(((,,....,....))).)))))...........{.((((((.{,,((((((((....)))),}))),...,,{.,.,{{|.,,,))))}),))))))}.|,||||}}}}}})))))}}}}|}||,},.....{{||{{{..,,,.,,||||...,,,|||{.....}}).....}}})))))))}..,||.,)))},..,||||{{{{,.(((((((.{....,))))))))))}})