Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ZZZ3_0009600

Sequence Length

269 nt

GC Content

0.3941

GGCAGCCCCUACCAGAGGUAGUCCCACUAAAAACAGUUCUCCUUACAGAGAAAAUGGACAAUUUGAGGAGAAUAAUCUUAGUCCUAAUGAAACAAAUGCAACUGUUAGUGAUAAUGUAAGUCAAUCUCCUACAAAUCCUGGUGAAAUUUCUCAAAAUGAAAAAGGGAUAUGUUGUGACUCUCAAAAUAAUGGAAGUGAAGGAGUAAGUAAACCACCCUCAGAGGCAAGACUCAAUAUUGGACAUUUGCCAUCUGCCAAAGAGAGUGCCA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-48.80 kcal/mol

Ensemble Metrics

Free Energy: -54.61

Frequency: 0.0001

Diversity: 45.52

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.((..(((((((((.....((((............(((((......)))))...)))).(((((((((((.....((((((((((((...............))))).)))....))))....)))))).))))).)))))....((((.......)))).))))...)))((..((((((................(((.((.........)))))((((((((((..((.......))..)))))).)))).....))))))..))

Thermodynamic Ensemble Prediction

({((..(((((((((.{|,.((((............(((((......)))))...)))).{((((((((((.....((((((((((((,.............}))))).)))....))))....)))))).)))))}))))),...{(((.......))}}.})))...))){{..((((((........,.......{((.{{.......,.}))))((((((((((..((,....,}),..)))))).)))).....))))))..)}