Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ZZZ3_0011200

Sequence Length

250 nt

GC Content

0.3480

GCGACCUGGUCAUACCCUGCUCCCUGGAGAUCACCAUAUUGAUGCCGAACUUAAUGCAGACACCUGAUUGACAUAGUGCACUACAACUUAGAACUCCUGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCUGAUGCUUAAGCUCCAUUCUAGAUCAUAGCUCCAACUCCUUCAGGAUAUAAGGAAAAGAGAUUAUAUUUCCACAAUGAUAGAUCUUUGGUUGUACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-29.90 kcal/mol

Ensemble Metrics

Free Energy: -33.77

Frequency: 0.0019

Diversity: 37.52

Structure Visualization

Structure Prediction

MFE Structure Prediction

(...)(((..((.(((......((.((((.((..........((((....(((((.(((....))))))))....).)))..........)).)))).))...................................................(((((......((((..............)))).........)))))...........(((((((.((((........))))))))))))))))..)))

Thermodynamic Ensemble Prediction

(.,,|(((..({.{{{......((.((((.((......,{{.((((....(((((.(((....))))))))....).)))...,,,....)).)))).))...................................................,,(({.{{,..,{{{........,,....)))}.....{{{,|,,}}....,}}}}..(((((((.((((........))))))))))))))))..)))