Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ZZZ3_0011600

Sequence Length

351 nt

GC Content

0.3618

AUAUCAAGUUAUUCUAGUACAACCAUAUAAAUAAAUAAUACCUGAAGUCUCAGUGUAACAUGGACAAUUAACAGUGAUGACAGAUAAAUACAGACGCAUGGGGAUCAAAUACUAGGCAAAACGCUUUUUAAAAGUGUAUCAGGCUUUUAAGAAACACUGCAGGAUCCUGUCUAUCUUAAUGCUGAUAGAGCUCAGCUAAAAAUUUAGGAGGUUCUAGUAUUCUUCAUGGCUGAAGCUGAGAGAGUCUGAAACCCUGAUGCUUAAGCUCCAUUCUAGAUCAUAGCUCCAACUCCUUCAGGAUAUAAGGAAAAGAGAUUAUAUUUCCACAAUGAUAGAUCUUUGGUUGUACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-72.20 kcal/mol

Ensemble Metrics

Free Energy: -80.14

Frequency: 0.0000

Diversity: 119.48

Structure Visualization

Structure Prediction

MFE Structure Prediction

(...........)((.((((((((..............(((((((....)))).)))..((((((((((..(((((...................((.(((..........))).)).......(((((((((((.......))))))))))).)))))...)))..)))))))((((((.((((..(((...(((((...((((((((((((.(((.(((((.(.((((....)))).))))))))).)))).((..((....))..))))))))))..)))))....)))..)))).)).))))....(((((((.((((........)))))))))))))))))))))

Thermodynamic Ensemble Prediction

({{......}},}((.((((((((,.............{{(((((,({{{{{,{{|,...{,,.......,}},|}},}}}.........,,,.,,({({((({....,,,,{,{{{....,||((({{{{||||,|.,,|,||||||}}}},....,|{{{....)))){((((......,,))}}}(({{{{{(((...,,{|||{|||,|}}||,||}|}}|,}}}}}}.,}}},.}}}}}}}}}},.,},|{},||....}},.,,,))}})}),.}}))).....||,|))))}.}.,,,},...,((((((.((((........)))))))))))))))))))))