Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr10_0584400

Sequence Length

250 nt

GC Content

0.3520

GUGGAUGCCAGGAAAGGCAUGCAGGAGGUCAGGAUAUGGGACAGAACCUCUAGGCAAGAAGGUCCCGCAGAUGGUACCCAUGGUGGGCAUCCACCGGUUUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAAAGGACAAGUUCCUUUACUUCUUGAGCUUCGGUUUCCUCAUCUGUAAACAUGAAAUAAAAAUUACAAUCUAAAAAAAUAAAUAAAAAGCCAGGCAUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-42.70 kcal/mol

Ensemble Metrics

Free Energy: -46.68

Frequency: 0.0016

Diversity: 37.31

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((.(((((......))))).).((((.((((((...(((((....((....)).......)))))....((((...))))(((((....))))).........................................................((((((.....))))))...)))))).)))).((((.(......).))))......................................))((....))

Thermodynamic Ensemble Prediction

(((.(((((......))))).).((((.((((((..{(((({....{{{{{..,..}},.,)))))}...((((...))))(((((....))))).........................................................((((((.....))))))...)))))).)))),{,..,},,,,.,{,{,..,|,,........,},,,.....................})((....))